vcftools-0.1.15-x86_64-1_slonly.txz


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Description

vcftools - A program package designed for working with VCF files

Property Value
Distribution Slackware 14.2
Repository Slackonly x86_64
Package filename vcftools-0.1.15-x86_64-1_slonly.txz
Package name vcftools
Package version 0.1.15
Package release 1_slonly
Package architecture x86_64
Package type txz
Homepage -
License -
Maintainer -
Download size 412.00 KB
Installed size 1.46 MB
VCFtools is a program package designed for working with VCF
files such as those generated by the 1000 Genomes Project.
The aim of VCFtools is to provide methods for working with
VCF files: validating, merging, comparing and calculate some
basic population genetic statistics.
Home: http://vcftools.sourceforge.net/
References: /usr/doc/vcftools-0.1.14_33_g1d27c24/References

Alternatives

Package Version Architecture Repository
vcftools-0.1.14_33_g1d27c24-i586-1_slonly.txz 0.1.14_33_g1d27c24 i586 Slackonly
vcftools - - -

Requires

Name Value
tabix -

Download

Type URL
Mirror packages.slackonly.com
Binary Package vcftools-0.1.15-x86_64-1_slonly.txz
Source Package -

Install Howto

  1. Download vcftools-0.1.15-x86_64-1_slonly.txz
  2. Install vcftools txz package:
    # upgradepkg --install-new vcftools-0.1.15-x86_64-1_slonly.txz

Files

Path
/install/slack-desc
/install/slack-required
/usr/
/usr/bin/fill-aa
/usr/bin/fill-an-ac
/usr/bin/fill-fs
/usr/bin/fill-ref-md5
/usr/bin/vcf-annotate
/usr/bin/vcf-compare
/usr/bin/vcf-concat
/usr/bin/vcf-consensus
/usr/bin/vcf-contrast
/usr/bin/vcf-convert
/usr/bin/vcf-fix-newlines
/usr/bin/vcf-fix-ploidy
/usr/bin/vcf-indel-stats
/usr/bin/vcf-isec
/usr/bin/vcf-merge
/usr/bin/vcf-phased-join
/usr/bin/vcf-query
/usr/bin/vcf-shuffle-cols
/usr/bin/vcf-sort
/usr/bin/vcf-stats
/usr/bin/vcf-subset
/usr/bin/vcf-to-tab
/usr/bin/vcf-tstv
/usr/bin/vcf-validator
/usr/bin/vcftools
/usr/doc/
/usr/doc/vcftools-0.1.15/ChangeLog
/usr/doc/vcftools-0.1.15/README.md
/usr/doc/vcftools-0.1.15/References
/usr/doc/vcftools-0.1.15/vcftools.SlackBuild
/usr/man/
/usr/man/man1/vcftools.1.gz
/usr/share/
/usr/share/perl5/
/usr/share/perl5/vendor_perl/FaSlice.pm
/usr/share/perl5/vendor_perl/Vcf.pm
/usr/share/perl5/vendor_perl/VcfStats.pm
/usr/share/vcftools/
/usr/share/vcftools/examples/annotate-test.vcf
/usr/share/vcftools/examples/annotate.out
/usr/share/vcftools/examples/annotate.txt
/usr/share/vcftools/examples/annotate2.out
/usr/share/vcftools/examples/annotate3.out
/usr/share/vcftools/examples/cmp-test-a-3.3.vcf
/usr/share/vcftools/examples/cmp-test-a.vcf
/usr/share/vcftools/examples/cmp-test-b-3.3.vcf
/usr/share/vcftools/examples/cmp-test-b.vcf
/usr/share/vcftools/examples/cmp-test.out
/usr/share/vcftools/examples/concat-a.vcf
/usr/share/vcftools/examples/concat-b.vcf
/usr/share/vcftools/examples/concat-c.vcf
/usr/share/vcftools/examples/concat.out
/usr/share/vcftools/examples/consensus.fa
/usr/share/vcftools/examples/consensus.out
/usr/share/vcftools/examples/consensus.out2
/usr/share/vcftools/examples/consensus.vcf
/usr/share/vcftools/examples/contrast.out
/usr/share/vcftools/examples/contrast.vcf
/usr/share/vcftools/examples/fill-an-ac.out
/usr/share/vcftools/examples/filters.txt
/usr/share/vcftools/examples/fix-ploidy.out
/usr/share/vcftools/examples/fix-ploidy.samples
/usr/share/vcftools/examples/fix-ploidy.txt
/usr/share/vcftools/examples/fix-ploidy.vcf
/usr/share/vcftools/examples/floats.vcf
/usr/share/vcftools/examples/indel-stats.out
/usr/share/vcftools/examples/indel-stats.tab
/usr/share/vcftools/examples/indel-stats.vcf
/usr/share/vcftools/examples/invalid-4.0.vcf
/usr/share/vcftools/examples/isec-n2-test.vcf.out
/usr/share/vcftools/examples/merge-test-a.vcf
/usr/share/vcftools/examples/merge-test-b.vcf
/usr/share/vcftools/examples/merge-test-c.vcf
/usr/share/vcftools/examples/merge-test.vcf.out
/usr/share/vcftools/examples/parse-test.vcf
/usr/share/vcftools/examples/perl-api-1.pl
/usr/share/vcftools/examples/query-test.out
/usr/share/vcftools/examples/shuffle-test.vcf
/usr/share/vcftools/examples/subset.SNPs.out
/usr/share/vcftools/examples/subset.indels.out
/usr/share/vcftools/examples/subset.vcf
/usr/share/vcftools/examples/valid-3.3.vcf
/usr/share/vcftools/examples/valid-4.0.vcf
/usr/share/vcftools/examples/valid-4.0.vcf.stats
/usr/share/vcftools/examples/valid-4.1.vcf

See Also

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veryprettytable-0.8.1-x86_64-1_slonly.txz Python tabular library
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