cap3-20091029-x86_64-2_slonly.txz


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Description

cap3 - CAP3: A DNA sequence assembly program

Distribution: Slackware 14.2
Repository: Slackonly x86_64
Package name: cap3
Package version: 20091029
Package release: 2_slonly
Package architecture: x86_64
Package type: txz
Installed size: 160.00 KB
Download size: 60.00 KB
Official Mirror: packages.slackonly.com
CAP3 if the third generation of the CAP sequence assembly program. The program has a capability to clip 5' and 3' low-quality regions of reads. It uses base quality values in computation of overlaps between reads, construction of multiple sequence alignments of reads, and generation of consensus sequences. Home: http://seq.cs.iastate.edu/ References: /usr/doc/cap3-20091029/References

Alternatives

    Download

    Source package: unknown

    Install Howto

    1. Download cap3-20091029-x86_64-2_slonly.txz
    2. Install cap3 txz package:
      # upgradepkg --install-new cap3-20091029-x86_64-2_slonly.txz

    Files

    • /install/slack-desc
    • /usr/
    • /usr/bin/cap3
    • /usr/bin/formcon
    • /usr/doc/
    • /usr/doc/cap3-20091029/LICENSE
    • /usr/doc/cap3-20091029/README
    • /usr/doc/cap3-20091029/References
    • /usr/doc/cap3-20091029/aceform
    • /usr/doc/cap3-20091029/cap3.SlackBuild
    • /usr/doc/cap3-20091029/doc
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