cufflinks-2.2.1-i586-1_slonly.txz


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Description

cufflinks - A reference-guided assembler for RNA-Seq experiments

Property Value
Distribution Slackware 14.2
Repository Slackonly i486
Package name cufflinks
Package version 2.2.1
Package release 1_slonly
Package architecture i586
Package type txz
Installed size 9.59 MB
Download size 1.38 MB
Official Mirror packages.slackonly.com
Cufflinks assembles transcripts, estimates their abundances,
and tests for differential expression and regulation in RNA-
Seq samples. It accepts aligned RNA-Seq reads and assembles
the alignments into a parsimonious set of transcripts.
Home: http://cufflinks.cbcb.umd.edu/
References: /usr/doc/cufflinks-2.2.1/References

Alternatives

Package Version Architecture Repository
cufflinks-2.2.1-x86_64-1_slonly.txz 2.2.1 x86_64 Slackonly
cufflinks - - -

Requires

Name Value
samtools -

Download

Type URL
Binary Package cufflinks-2.2.1-i586-1_slonly.txz
Source Package unknown

Install Howto

  1. Download cufflinks-2.2.1-i586-1_slonly.txz
  2. Install cufflinks txz package:
    # upgradepkg --install-new cufflinks-2.2.1-i586-1_slonly.txz

Files

Path
/install/slack-desc
/install/slack-required
/usr/
/usr/bin/compress_gtf
/usr/bin/cuffcompare
/usr/bin/cuffdiff
/usr/bin/cufflinks
/usr/bin/cuffmerge
/usr/bin/cuffnorm
/usr/bin/cuffquant
/usr/bin/gffread
/usr/bin/gtf_to_sam
/usr/doc/
/usr/doc/cufflinks-2.2.1/AUTHORS
/usr/doc/cufflinks-2.2.1/LICENSE
/usr/doc/cufflinks-2.2.1/README
/usr/doc/cufflinks-2.2.1/References
/usr/doc/cufflinks-2.2.1/cufflinks.SlackBuild

See Also

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cups-pdf-3.0.1-i586-1_slonly.txz PDF printer for cups
cups-windows-6.0-noarch-1_slonly.txz CUPS PostScript driver for Windows
curlftpfs-0.9.2-i586-1_slonly.txz Mount FTP/SFTP via fuse
curlpp-0.7.3-i586-1_slonly.txz C++ wrapper for libcURL
curseofwar-1.2.0-i586-1_slonly.txz RTS game
curses_ex-0.3-i586-1_slonly.txz additional curses functions
curtain-0.3-i586-1_slonly.txz Display a curtain on the desktop
curtsies-0.2.11-i586-1_slonly.txz Curses-like terminal wrapper
cutadapt-1.13-i586-1_slonly.txz Trim adapters from high-throughput sequencing reads
cutecom-0.22.0-i586-2_slonly.txz graphical serial terminal
cutemaze-1.1.1-i586-1_slonly.txz top-down maze game
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