cufflinks-2.2.1-i586-1_slonly.txz


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Description

cufflinks - A reference-guided assembler for RNA-Seq experiments

Distribution: Slackware 14.2
Repository: Slackonly i486
Package name: cufflinks
Package version: 2.2.1
Package release: 1_slonly
Package architecture: i586
Package type: txz
Installed size: 9.59 MB
Download size: 1.38 MB
Official Mirror: packages.slackonly.com
Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA- Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Home: http://cufflinks.cbcb.umd.edu/ References: /usr/doc/cufflinks-2.2.1/References

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Requires

    Download

    Source package: unknown

    Install Howto

    1. Download cufflinks-2.2.1-i586-1_slonly.txz
    2. Install cufflinks txz package:
      # upgradepkg --install-new cufflinks-2.2.1-i586-1_slonly.txz

    Files

    • /install/slack-desc
    • /install/slack-required
    • /usr/
    • /usr/bin/compress_gtf
    • /usr/bin/cuffcompare
    • /usr/bin/cuffdiff
    • /usr/bin/cufflinks
    • /usr/bin/cuffmerge
    • /usr/bin/cuffnorm
    • /usr/bin/cuffquant
    • /usr/bin/gffread
    • /usr/bin/gtf_to_sam
    • /usr/doc/
    • /usr/doc/cufflinks-2.2.1/AUTHORS
    • /usr/doc/cufflinks-2.2.1/LICENSE
    • /usr/doc/cufflinks-2.2.1/README
    • /usr/doc/cufflinks-2.2.1/References
    • /usr/doc/cufflinks-2.2.1/cufflinks.SlackBuild
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