cistrome-mdseqpos-git_20150729_7bcbf79-i586-1_slonly.txz


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Description

cistrome-mdseqpos - Cistrome Applications Harvard mdseqpos

Distribution: Slackware 14.2
Repository: Slackonly i486
Package name: cistrome-mdseqpos
Package version: git_20150729_7bcbf79
Package release: 1_slonly
Package architecture: i586
Package type: txz
Installed size: 12.85 MB
Download size: 1.05 MB
Official Mirror: packages.slackonly.com
This is cistrome-mdseqpos, part of the Cistrome-Applications-Harvard project.

    Download

    Source package: unknown

    Install Howto

    1. Download cistrome-mdseqpos-git_20150729_7bcbf79-i586-1_slonly.txz
    2. Install cistrome-mdseqpos txz package:
      # upgradepkg --install-new cistrome-mdseqpos-git_20150729_7bcbf79-i586-1_slonly.txz

    Files

    • /install/slack-desc
    • /install/slack-required
    • /usr/
    • /usr/bin/MDSeqPos.py
    • /usr/bin/MotifScan.py
    • /usr/doc/
    • /usr/doc/cistrome-mdseqpos-git_20150729_7bcbf79/LICENSE.txt
    • /usr/doc/cistrome-mdseqpos-git_20150729_7bcbf79/cistrome-mdseqpos.SlackBuild
    • /usr/lib/
    • /usr/lib/python2.7/
    • /usr/lib/python2.7/site-packages/mdseqpos-1.01-py2.7.egg-info
    • /usr/lib/python2.7/site-packages/mdseqpos/Prob.py
    • /usr/lib/python2.7/site-packages/mdseqpos/Prob.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/_MDmod.so
    • /usr/lib/python2.7/site-packages/mdseqpos/__init__.py
    • /usr/lib/python2.7/site-packages/mdseqpos/__init__.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/_seq.so
    • /usr/lib/python2.7/site-packages/mdseqpos/bayesian_motif_comp.py
    • /usr/lib/python2.7/site-packages/mdseqpos/bayesian_motif_comp.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/chipregions.py
    • /usr/lib/python2.7/site-packages/mdseqpos/chipregions.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/count.so
    • /usr/lib/python2.7/site-packages/mdseqpos/motif.py
    • /usr/lib/python2.7/site-packages/mdseqpos/motif.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/pwmclus_motif_comp.py
    • /usr/lib/python2.7/site-packages/mdseqpos/pwmclus_motif_comp.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/settings.py
    • /usr/lib/python2.7/site-packages/mdseqpos/settings.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/database/MotifParser.py
    • /usr/lib/python2.7/site-packages/mdseqpos/database/MotifParser.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/database/__init__.py
    • /usr/lib/python2.7/site-packages/mdseqpos/database/__init__.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/database/cistrome.cluster
    • /usr/lib/python2.7/site-packages/mdseqpos/database/cistrome.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/database/db_xml2cluster.py
    • /usr/lib/python2.7/site-packages/mdseqpos/database/db_xml2cluster.pyc
    • /usr/lib/python2.7/site-packages/mdseqpos/database/encode.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/database/hpdi.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/database/jaspar.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/database/pbm.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/database/transfac.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/database/y1h.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/template/mdseqpos_index.html
    • /usr/lib/python2.7/site-packages/mdseqpos/template/mdseqpos_out.html
    • /usr/lib/python2.7/site-packages/mdseqpos/template/single_motif.html
    • /usr/lib/python2.7/site-packages/mdseqpos/template/single_pssm.html
    • /usr/lib/python2.7/site-packages/mdseqpos/template/table.html
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/Utils.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/focus_frame_2.html
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/highcharts.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/jquery-1.7.2.min.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/mdseqpos_out.css
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/mdseqpos_out.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/prototype.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/pssm_popup.css
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/seedrandom.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/dna/a.png
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/dna/c.png
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/dna/g.png
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/dna/goLogo.js
    • /usr/lib/python2.7/site-packages/mdseqpos/template/static/dna/t.png
    • /usr/lib/python2.7/site-packages/mdseqpos/tools/twoBitToFa
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/Crooks-2004-GR-WebLogo.pdf
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/LICENSE
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/README
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/clustal.dat
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/examples.html
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/globin.fasta
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/index.html
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/info.html
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/logo.cgi
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/logo.conf
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/logo.conf.init
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/logo.css
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/logo.pm
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/logo.xml
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/seqlogo
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/template.eps
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/template.pm
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/test.html
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/cache/notes
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/argR.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/cap_dna.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/cap_hth.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/crp_dna.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/dnaA.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/ecoli10.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/ecoli35.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/exon-intron.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/globins.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/hns.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/hth.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/info.gif
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/intron-exon.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/lexA.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/prenyl.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/weblogo-fig1.png
    • /usr/lib/python2.7/site-packages/mdseqpos/weblogo/img/weblogologo.png
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