cistrome-extra-git_20150729_7bcbf79-i586-1_slonly.txz


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Description

cistrome-extra - Cistrome Applications Harvard extra apps

Distribution: Slackware 14.2
Repository: Slackonly i486
Package name: cistrome-extra
Package version: git_20150729_7bcbf79
Package release: 1_slonly
Package architecture: i586
Package type: txz
Installed size: 1.04 MB
Download size: 176.00 KB
Official Mirror: packages.slackonly.com
This is cistrome-extra, part of the Cistrome-Applications-Harvard project.

    Download

    Source package: unknown

    Install Howto

    1. Download cistrome-extra-git_20150729_7bcbf79-i586-1_slonly.txz
    2. Install cistrome-extra txz package:
      # upgradepkg --install-new cistrome-extra-git_20150729_7bcbf79-i586-1_slonly.txz

    Files

    • /install/doinst.sh
    • /install/slack-desc
    • /usr/
    • /usr/bin/PCGA.py
    • /usr/bin/RegPotential.py
    • /usr/bin/bedToWig2.py
    • /usr/bin/bed_correlation.py
    • /usr/bin/bigwig_correlation.py
    • /usr/bin/bigwig_correlation_in_bed_file.py
    • /usr/bin/conservation_plot.py
    • /usr/bin/convert_ids.py
    • /usr/bin/count_probes_in_peaks.py
    • /usr/bin/count_probes_in_ranges.py
    • /usr/bin/drawBED.py
    • /usr/bin/expressPkgr.py
    • /usr/bin/fq2fa.py
    • /usr/bin/heatmapr
    • /usr/bin/naive_call_peaks.py
    • /usr/bin/prof_sort.py
    • /usr/bin/qc_chIP_peak.py
    • /usr/bin/qc_chIP_peakBW.py
    • /usr/bin/qc_chIP_whole.py
    • /usr/bin/randPos
    • /usr/bin/standardize_wig.py
    • /usr/bin/venn_diagram.py
    • /usr/bin/wigLiftover.py
    • /usr/bin/wigToBed.py
    • /usr/bin/wig_call_peaks.py
    • /usr/bin/wig_call_peaks2
    • /usr/bin/wig_correlation.py
    • /usr/bin/wig_correlation_in_bed_file.py
    • /usr/bin/wig_extract_chrom.py
    • /usr/bin/wiggle_reformat.py
    • /usr/bin/xyz2image.py
    • /usr/doc/
    • /usr/doc/cistrome-extra-git_20150729_7bcbf79/LICENSE.txt
    • /usr/doc/cistrome-extra-git_20150729_7bcbf79/cistrome-extra.SlackBuild
    • /usr/lib/
    • /usr/lib/python2.7/
    • /usr/lib/python2.7/site-packages/cistrome_extra_apps-1.0-py2.7.egg-info
    • /usr/lib/python2.7/site-packages/CistromeAP/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/BwReader.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/BwReader.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/R.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/R.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/corelib.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/corelib.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/graphics.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/graphics.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/inout.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/inout.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/myfunc.py
    • /usr/lib/python2.7/site-packages/CistromeAP/jianlib/myfunc.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Algorithm/BWT.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Algorithm/BWT.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Algorithm/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Algorithm/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/Func.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/Func.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/Overlap.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/Overlap.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/Prob.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/Prob.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BasicStat/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BinKeeper/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/BinKeeper/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/BinKeeper.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/BinKeeper.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/DataCollection.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/DataCollection.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/NDD.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/NDD.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/dbMotif.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/dbMotif.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/dbRawChIP.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/DB/dbRawChIP.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/FeatIO/Motif.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/FeatIO/Motif.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/FeatIO/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/FeatIO/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/BedIO.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/BedIO.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/MotifScan.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/MotifScan.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/TagIO.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/TagIO.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/WiggleIO.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/WiggleIO.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/XLSIO.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/XLSIO.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/Parser/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/SeqIO/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/SeqIO/__init__.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/WWW/GEO.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/WWW/GEO.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/WWW/Search.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/WWW/Search.pyc
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/WWW/__init__.py
    • /usr/lib/python2.7/site-packages/CistromeAP/taolib/CoreLib/WWW/__init__.pyc
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