cistrome-MACS-1.4.2-i586-1_slonly.txz


Advertisement

Description

cistrome-MACS - MACS: Model-based Analysis of ChIP-Seq

Property Value
Distribution Slackware 14.2
Repository Slackonly i486
Package name cistrome-MACS
Package version 1.4.2
Package release 1_slonly
Package architecture i586
Package type txz
Installed size 480.00 KB
Download size 88.00 KB
Official Mirror packages.slackonly.com
Next generation parallel sequencing technologies made chromatin
immunoprecipitation followed by sequencing (ChIP-Seq) a popular
strategy to study genome-wide protein-DNA interactions, while
creating challenges for analysis algorithms. We present Model-
based Analysis of ChIP-Seq (MACS) on short reads sequencers such
as Genome Analyzer (Illumina / Solexa).
Home: http://liulab.dfci.harvard.edu/MACS/
References: /usr/doc/cistrome-MACS-1.4.2/References

Alternatives

Package Version Architecture Repository
cistrome-MACS - - -

Download

Type URL
Binary Package cistrome-MACS-1.4.2-i586-1_slonly.txz
Source Package unknown

Install Howto

  1. Download cistrome-MACS-1.4.2-i586-1_slonly.txz
  2. Install cistrome-MACS txz package:
    # upgradepkg --install-new cistrome-MACS-1.4.2-i586-1_slonly.txz

Files

Path
/install/doinst.sh
/install/slack-desc
/usr/
/usr/bin/elandexport2bed
/usr/bin/elandmulti2bed
/usr/bin/elandresult2bed
/usr/bin/macs14
/usr/bin/sam2bed
/usr/bin/wignorm
/usr/doc/
/usr/doc/cistrome-MACS-1.4.2/COPYING
/usr/doc/cistrome-MACS-1.4.2/ChangeLog
/usr/doc/cistrome-MACS-1.4.2/INSTALL
/usr/doc/cistrome-MACS-1.4.2/NEW_IN_MACS14
/usr/doc/cistrome-MACS-1.4.2/PKG-INFO
/usr/doc/cistrome-MACS-1.4.2/README
/usr/doc/cistrome-MACS-1.4.2/References
/usr/doc/cistrome-MACS-1.4.2/cistrome-MACS.SlackBuild
/usr/lib/
/usr/lib/python2.7/
/usr/lib/python2.7/site-packages/MACS-1.4.2-py2.7.egg-info
/usr/lib/python2.7/site-packages/MACS14/Constants.py
/usr/lib/python2.7/site-packages/MACS14/Constants.pyc
/usr/lib/python2.7/site-packages/MACS14/OptValidator.py
/usr/lib/python2.7/site-packages/MACS14/OptValidator.pyc
/usr/lib/python2.7/site-packages/MACS14/OutputWriter.py
/usr/lib/python2.7/site-packages/MACS14/OutputWriter.pyc
/usr/lib/python2.7/site-packages/MACS14/PeakDetect.py
/usr/lib/python2.7/site-packages/MACS14/PeakDetect.pyc
/usr/lib/python2.7/site-packages/MACS14/PeakModel.py
/usr/lib/python2.7/site-packages/MACS14/PeakModel.pyc
/usr/lib/python2.7/site-packages/MACS14/Prob.py
/usr/lib/python2.7/site-packages/MACS14/Prob.pyc
/usr/lib/python2.7/site-packages/MACS14/__init__.py
/usr/lib/python2.7/site-packages/MACS14/__init__.pyc
/usr/lib/python2.7/site-packages/MACS14/IO/BinKeeper.py
/usr/lib/python2.7/site-packages/MACS14/IO/BinKeeper.pyc
/usr/lib/python2.7/site-packages/MACS14/IO/FeatIO.py
/usr/lib/python2.7/site-packages/MACS14/IO/FeatIO.pyc
/usr/lib/python2.7/site-packages/MACS14/IO/Parser.py
/usr/lib/python2.7/site-packages/MACS14/IO/Parser.pyc
/usr/lib/python2.7/site-packages/MACS14/IO/WiggleIO.py
/usr/lib/python2.7/site-packages/MACS14/IO/WiggleIO.pyc
/usr/lib/python2.7/site-packages/MACS14/IO/__init__.py
/usr/lib/python2.7/site-packages/MACS14/IO/__init__.pyc
/usr/lib/python2.7/site-packages/MACS14/IO/bedGraphIO.py
/usr/lib/python2.7/site-packages/MACS14/IO/bedGraphIO.pyc

See Also

Package Description
cistrome-conductGO-1.0-i586-1_slonly.txz find the top-n highest expressed TFs
cistrome-extra-git_20150729_7bcbf79-i586-1_slonly.txz Cistrome Applications Harvard extra apps
cistrome-mdseqpos-git_20150729_7bcbf79-i586-1_slonly.txz Cistrome Applications Harvard mdseqpos
ckermit-9.0.302-i586-1_slonly.txz combined network and serial communication software package
cksfv-1.3.14-i586-1_slonly.txz command line tool for .sfv files
clalsadrv-2.0.0-i586-1_slonly.txz Alsa library for Aeolus
clam-r15456-i586-1_slonly.txz C++ Library for Audio and Music
clam_annotator-0.5.0-i586-2_slonly.txz Music annotation tool
clam_voice2midi-0.3.10-i586-2_slonly.txz convert singing/humming into MIDI files
clamav-0.99.2-i586-2_slonly.txz a GPL-ed virus scanner
clamav-unofficial-sigs-5.6.2-noarch-2_slonly.txz unofficial clamav signatures
clamsmtp-1.10-i586-4_slonly.txz ClamAV SMTP filter
clamtk-5.24-i586-1_slonly.txz A frontend for ClamAV
clamz-0.5-i586-1_slonly.txz command-line program to download MP3s from amazon.com
claws-mail-3.15.0-i586-1_slonly.txz a user-friendly, lightweight, and fast email client
Advertisement
Advertisement