cistrome-MACS-1.4.2-i586-1_slonly.txz


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Description

cistrome-MACS - MACS: Model-based Analysis of ChIP-Seq

Distribution: Slackware 14.2
Repository: Slackonly i486
Package name: cistrome-MACS
Package version: 1.4.2
Package release: 1_slonly
Package architecture: i586
Package type: txz
Installed size: 480.00 KB
Download size: 88.00 KB
Official Mirror: packages.slackonly.com
Next generation parallel sequencing technologies made chromatin immunoprecipitation followed by sequencing (ChIP-Seq) a popular strategy to study genome-wide protein-DNA interactions, while creating challenges for analysis algorithms. We present Model- based Analysis of ChIP-Seq (MACS) on short reads sequencers such as Genome Analyzer (Illumina / Solexa). Home: http://liulab.dfci.harvard.edu/MACS/ References: /usr/doc/cistrome-MACS-1.4.2/References

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    Install Howto

    1. Download cistrome-MACS-1.4.2-i586-1_slonly.txz
    2. Install cistrome-MACS txz package:
      # upgradepkg --install-new cistrome-MACS-1.4.2-i586-1_slonly.txz

    Files

    • /install/doinst.sh
    • /install/slack-desc
    • /usr/
    • /usr/bin/elandexport2bed
    • /usr/bin/elandmulti2bed
    • /usr/bin/elandresult2bed
    • /usr/bin/macs14
    • /usr/bin/sam2bed
    • /usr/bin/wignorm
    • /usr/doc/
    • /usr/doc/cistrome-MACS-1.4.2/COPYING
    • /usr/doc/cistrome-MACS-1.4.2/ChangeLog
    • /usr/doc/cistrome-MACS-1.4.2/INSTALL
    • /usr/doc/cistrome-MACS-1.4.2/NEW_IN_MACS14
    • /usr/doc/cistrome-MACS-1.4.2/PKG-INFO
    • /usr/doc/cistrome-MACS-1.4.2/README
    • /usr/doc/cistrome-MACS-1.4.2/References
    • /usr/doc/cistrome-MACS-1.4.2/cistrome-MACS.SlackBuild
    • /usr/lib/
    • /usr/lib/python2.7/
    • /usr/lib/python2.7/site-packages/MACS-1.4.2-py2.7.egg-info
    • /usr/lib/python2.7/site-packages/MACS14/Constants.py
    • /usr/lib/python2.7/site-packages/MACS14/Constants.pyc
    • /usr/lib/python2.7/site-packages/MACS14/OptValidator.py
    • /usr/lib/python2.7/site-packages/MACS14/OptValidator.pyc
    • /usr/lib/python2.7/site-packages/MACS14/OutputWriter.py
    • /usr/lib/python2.7/site-packages/MACS14/OutputWriter.pyc
    • /usr/lib/python2.7/site-packages/MACS14/PeakDetect.py
    • /usr/lib/python2.7/site-packages/MACS14/PeakDetect.pyc
    • /usr/lib/python2.7/site-packages/MACS14/PeakModel.py
    • /usr/lib/python2.7/site-packages/MACS14/PeakModel.pyc
    • /usr/lib/python2.7/site-packages/MACS14/Prob.py
    • /usr/lib/python2.7/site-packages/MACS14/Prob.pyc
    • /usr/lib/python2.7/site-packages/MACS14/__init__.py
    • /usr/lib/python2.7/site-packages/MACS14/__init__.pyc
    • /usr/lib/python2.7/site-packages/MACS14/IO/BinKeeper.py
    • /usr/lib/python2.7/site-packages/MACS14/IO/BinKeeper.pyc
    • /usr/lib/python2.7/site-packages/MACS14/IO/FeatIO.py
    • /usr/lib/python2.7/site-packages/MACS14/IO/FeatIO.pyc
    • /usr/lib/python2.7/site-packages/MACS14/IO/Parser.py
    • /usr/lib/python2.7/site-packages/MACS14/IO/Parser.pyc
    • /usr/lib/python2.7/site-packages/MACS14/IO/WiggleIO.py
    • /usr/lib/python2.7/site-packages/MACS14/IO/WiggleIO.pyc
    • /usr/lib/python2.7/site-packages/MACS14/IO/__init__.py
    • /usr/lib/python2.7/site-packages/MACS14/IO/__init__.pyc
    • /usr/lib/python2.7/site-packages/MACS14/IO/bedGraphIO.py
    • /usr/lib/python2.7/site-packages/MACS14/IO/bedGraphIO.pyc
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