aline-1.0.025-noarch-2_slonly.txz


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Description

aline - A Sequence Alignment Editor and Viewer

Distribution: Slackware 14.2
Repository: Slackonly i486
Package name: aline
Package version: 1.0.025
Package release: 2_slonly
Package architecture: noarch
Package type: txz
Installed size: 2.60 MB
Download size: 696.00 KB
Official Mirror: packages.slackonly.com
Aline: An Extensible WYSIWYG Protein Sequence Alignment Editor Publication Quality Figures. Aline is an interactive perl/tk application which can read common sequence alignment formats which the user can then alter, embellish, markup etc to produce the kind of sequence figure commonly found in biochemical articles. Home: http://crystal.bcs.uwa.edu.au/px/charlie/software/aline/ References: /usr/doc/aline-1.0.025/References

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Requires

    Download

    Source package: unknown

    Install Howto

    1. Download aline-1.0.025-noarch-2_slonly.txz
    2. Install aline txz package:
      # upgradepkg --install-new aline-1.0.025-noarch-2_slonly.txz

    Files

    • /install/doinst.sh
    • /install/slack-desc
    • /install/slack-required
    • /usr/
    • /usr/bin/aline
    • /usr/bin/convertdump
    • /usr/doc/
    • /usr/doc/aline-1.0.025/References
    • /usr/doc/aline-1.0.025/aline.SlackBuild
    • /usr/share/
    • /usr/share/aline/
    • /usr/share/aline/colourschemes/Cyan to Red (50 levels).alc
    • /usr/share/aline/colourschemes/Greyscale (10 levels).alc
    • /usr/share/aline/colourschemes/Saturation (Blue, 50 levels).alc
    • /usr/share/aline/colourschemes/Saturation (Red, 50 levels).alc
    • /usr/share/aline/colourschemes/Saturation (Yellow, 50 levels).alc
    • /usr/share/aline/example/rada.aline
    • /usr/share/aline/example/rada.eps
    • /usr/share/aline/example/rada.png
    • /usr/share/aline/plugins/AlinePlugin.pm
    • /usr/share/aline/plugins/aColourPicker.plugin
    • /usr/share/aline/plugins/aDeleteResidues.plugin
    • /usr/share/aline/plugins/aProtTool.plugin
    • /usr/share/aline/plugins/cCalCons.plugin
    • /usr/share/aline/plugins/cCalSim.plugin
    • /usr/share/aline/plugins/cClearSeq.plugin
    • /usr/share/aline/plugins/cColBfac.plugin
    • /usr/share/aline/plugins/cColRes.plugin
    • /usr/share/aline/plugins/eAddBlast.plugin
    • /usr/share/aline/plugins/eSeqList.plugin
    • /usr/share/aline/plugins/fInputPDB.plugin
    • /usr/share/aline/plugins/fInputPIR.plugin
    • /usr/share/aline/plugins/mDefaultCM.plugin
    • /usr/share/aline/plugins/mDefaultTooltips.plugin
    • /usr/share/aline/plugins/mKeycodeTest.inactive
    • /usr/share/aline/plugins/sPrint.plugin
    • /usr/share/aline/plugins/tAddConsensus.plugin
    • /usr/share/aline/plugins/tAddDisEmbl.plugin
    • /usr/share/aline/plugins/tAddGraph.plugin
    • /usr/share/aline/plugins/tAddNumbers.plugin
    • /usr/share/aline/plugins/tAddSecStruct.plugin
    • /usr/share/aline/plugins/tAddSignalP.plugin
    • /usr/share/aline/plugins/tAlignment.plugin
    • /usr/share/aline/plugins/tClearGapCols.plugin
    • /usr/share/aline/plugins/tCorrMutations.plugin
    • /usr/share/aline/plugins/tFixDbnames.plugin
    • /usr/share/aline/plugins/tMatchPattern.plugin
    • /usr/share/aline/plugins/tPymolColors.plugin
    • /usr/share/aline/plugins/tRunChainsaw.plugin
    • /usr/share/aline/plugins/tUnattachAll.plugin
    • /usr/share/aline/plugins/tUndupe.plugin
    • /usr/share/aline/plugins/test.dat
    • /usr/share/applications/aline.desktop
    • /usr/share/pixmaps/aline.png
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