HMMER-3.1b2-i586-1_slonly.txz


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Description

HMMER - Biosequence analysis using profile hidden Markov models

Property Value
Distribution Slackware 14.2
Repository Slackonly i486
Package name HMMER
Package version 3.1b2
Package release 1_slonly
Package architecture i586
Package type txz
Installed size 18.10 MB
Download size 2.20 MB
Official Mirror packages.slackonly.com
HMMER is used for searching sequence databases for sequence
homologs, and for making sequence alignments. It implements
methods using probabilistic models called profile hidden Markov
models (profile HMMs).
Home: http://hmmer.org/
Publications: http://hmmer.org/publications.html

Alternatives

Package Version Architecture Repository
HMMER-3.2.1-x86_64-1_slonly.txz 3.2.1 x86_64 Slackonly
HMMER - - -

Download

Type URL
Binary Package HMMER-3.1b2-i586-1_slonly.txz
Source Package unknown

Install Howto

  1. Download HMMER-3.1b2-i586-1_slonly.txz
  2. Install HMMER txz package:
    # upgradepkg --install-new HMMER-3.1b2-i586-1_slonly.txz

Files

Path
/install/slack-desc
/usr/
/usr/bin/alimask
/usr/bin/hmmalign
/usr/bin/hmmbuild
/usr/bin/hmmc2
/usr/bin/hmmconvert
/usr/bin/hmmemit
/usr/bin/hmmerfm-exactmatch
/usr/bin/hmmfetch
/usr/bin/hmmlogo
/usr/bin/hmmpgmd
/usr/bin/hmmpress
/usr/bin/hmmscan
/usr/bin/hmmsearch
/usr/bin/hmmsim
/usr/bin/hmmstat
/usr/bin/jackhmmer
/usr/bin/makehmmerdb
/usr/bin/nhmmer
/usr/bin/nhmmscan
/usr/bin/phmmer
/usr/doc/
/usr/doc/HMMER-3.1b2/HMMER.SlackBuild
/usr/doc/HMMER-3.1b2/INSTALL
/usr/doc/HMMER-3.1b2/LICENSE
/usr/doc/HMMER-3.1b2/README
/usr/doc/HMMER-3.1b2/Userguide.pdf
/usr/doc/HMMER-3.1b2/release-notes
/usr/include/cachedb.h
/usr/include/hmmer.h
/usr/include/impl_sse.h
/usr/include/p7_config.h
/usr/include/p7_gbands.h
/usr/include/p7_gmxb.h
/usr/include/p7_gmxchk.h
/usr/include/p7_hmmcache.h
/usr/lib/libhmmer.a
/usr/man/
/usr/man/man1/alimask.1.gz
/usr/man/man1/hmmalign.1.gz
/usr/man/man1/hmmbuild.1.gz
/usr/man/man1/hmmconvert.1.gz
/usr/man/man1/hmmemit.1.gz
/usr/man/man1/hmmer.1.gz
/usr/man/man1/hmmfetch.1.gz
/usr/man/man1/hmmlogo.1.gz
/usr/man/man1/hmmpgmd.1.gz
/usr/man/man1/hmmpress.1.gz
/usr/man/man1/hmmscan.1.gz
/usr/man/man1/hmmsearch.1.gz
/usr/man/man1/hmmsim.1.gz
/usr/man/man1/hmmstat.1.gz
/usr/man/man1/jackhmmer.1.gz
/usr/man/man1/makehmmerdb.1.gz
/usr/man/man1/nhmmer.1.gz
/usr/man/man1/nhmmscan.1.gz
/usr/man/man1/phmmer.1.gz
/usr/share/
/usr/share/HMMER/7LESS_DROME
/usr/share/HMMER/HBB_HUMAN
/usr/share/HMMER/MADE1.hmm
/usr/share/HMMER/MADE1.hmm.h3f
/usr/share/HMMER/MADE1.hmm.h3i
/usr/share/HMMER/MADE1.hmm.h3m
/usr/share/HMMER/MADE1.hmm.h3p
/usr/share/HMMER/MADE1.out
/usr/share/HMMER/MADE1.sto
/usr/share/HMMER/Pkinase.hmm
/usr/share/HMMER/Pkinase.sto
/usr/share/HMMER/dna_target.fa
/usr/share/HMMER/fn3.hmm
/usr/share/HMMER/fn3.out
/usr/share/HMMER/fn3.sto
/usr/share/HMMER/globins4.hmm
/usr/share/HMMER/globins4.out
/usr/share/HMMER/globins4.sto
/usr/share/HMMER/globins45.fa
/usr/share/HMMER/minifam
/usr/share/HMMER/minifam.h3f
/usr/share/HMMER/minifam.h3i
/usr/share/HMMER/minifam.h3m
/usr/share/HMMER/minifam.h3p

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