bowtie2-2.1.0-x86_64-1_slack.txz


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Description

bowtie2 - A tool for aligning sequencing reads

Property Value
Distribution Slackware 14.1
Repository Slackonly x86_64
Package filename bowtie2-2.1.0-x86_64-1_slack.txz
Package name bowtie2
Package version 2.1.0
Package release 1_slack
Package architecture x86_64
Package type txz
Homepage -
License -
Maintainer -
Download size 5.41 MB
Installed size 7.14 MB
Bowtie 2 is an ultrafast and memory-efficient tool for aligning
sequencing reads to long reference sequences. It is particularly
good at aligning reads of about 50 up to 100s or 1,000s of
characters, and particularly good at aligning to relatively long
(e.g. mammalian) genomes.
Home: http://bowtie-bio.sourceforge.net/bowtie2/index.shtml
References: /usr/doc/bowtie2-2.1.0/References

Alternatives

Package Version Architecture Repository
bowtie2-2.1.0-i486-1_slack.txz 2.1.0 i486 Slackonly
bowtie2 - - -

Download

Type URL
Mirror packages.slackonly.com
Binary Package bowtie2-2.1.0-x86_64-1_slack.txz
Source Package -

Install Howto

  1. Download bowtie2-2.1.0-x86_64-1_slack.txz
  2. Install bowtie2 txz package:
    # upgradepkg --install-new bowtie2-2.1.0-x86_64-1_slack.txz

Files

Path
/install/slack-desc
/usr/
/usr/bin/bowtie2
/usr/bin/bowtie2-align
/usr/bin/bowtie2-build
/usr/bin/bowtie2-inspect
/usr/doc/
/usr/doc/bowtie2-2.1.0/AUTHORS
/usr/doc/bowtie2-2.1.0/LICENSE
/usr/doc/bowtie2-2.1.0/MANUAL
/usr/doc/bowtie2-2.1.0/NEWS
/usr/doc/bowtie2-2.1.0/References
/usr/doc/bowtie2-2.1.0/TUTORIAL
/usr/doc/bowtie2-2.1.0/VERSION
/usr/doc/bowtie2-2.1.0/bowtie2.SlackBuild
/usr/doc/bowtie2-2.1.0/doc/README
/usr/doc/bowtie2-2.1.0/doc/manual.html
/usr/doc/bowtie2-2.1.0/doc/strip_markdown.pl
/usr/doc/bowtie2-2.1.0/doc/style.css
/usr/share/
/usr/share/bowtie2/
/usr/share/bowtie2/example/
/usr/share/bowtie2/example/index/lambda_virus.1.bt2.gz
/usr/share/bowtie2/example/index/lambda_virus.2.bt2.gz
/usr/share/bowtie2/example/index/lambda_virus.3.bt2.gz
/usr/share/bowtie2/example/index/lambda_virus.4.bt2.gz
/usr/share/bowtie2/example/index/lambda_virus.rev.1.bt2.gz
/usr/share/bowtie2/example/index/lambda_virus.rev.2.bt2.gz
/usr/share/bowtie2/example/reads/longreads.fq.gz
/usr/share/bowtie2/example/reads/reads_1.fq.gz
/usr/share/bowtie2/example/reads/reads_2.fq.gz
/usr/share/bowtie2/example/reads/simulate.pl
/usr/share/bowtie2/example/reference/lambda_virus.fa
/usr/share/bowtie2/scripts/convert_quals.pl
/usr/share/bowtie2/scripts/gen_2b_occ_lookup.pl
/usr/share/bowtie2/scripts/gen_occ_lookup.pl
/usr/share/bowtie2/scripts/gen_solqual_lookup.pl
/usr/share/bowtie2/scripts/infer_fraglen.pl
/usr/share/bowtie2/scripts/make_a_thaliana_tair.sh
/usr/share/bowtie2/scripts/make_b_taurus_UMD3.sh
/usr/share/bowtie2/scripts/make_c_elegans.sh
/usr/share/bowtie2/scripts/make_canFam2.sh
/usr/share/bowtie2/scripts/make_d_melanogaster.sh
/usr/share/bowtie2/scripts/make_e_coli.sh
/usr/share/bowtie2/scripts/make_h_sapiens_ncbi36.sh
/usr/share/bowtie2/scripts/make_h_sapiens_ncbi37.sh
/usr/share/bowtie2/scripts/make_hg18.sh
/usr/share/bowtie2/scripts/make_hg19.sh
/usr/share/bowtie2/scripts/make_m_musculus_ncbi37.sh
/usr/share/bowtie2/scripts/make_mm10.sh
/usr/share/bowtie2/scripts/make_mm9.sh
/usr/share/bowtie2/scripts/make_rn4.sh
/usr/share/bowtie2/scripts/make_s_cerevisiae.sh

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