bowtie-1.0.0-x86_64-1_slack.txz


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Description

bowtie - A short read aligner of DNA sequences

Property Value
Distribution Slackware 14.1
Repository Slackonly x86_64
Package filename bowtie-1.0.0-x86_64-1_slack.txz
Package name bowtie
Package version 1.0.0
Package release 1_slack
Package architecture x86_64
Package type txz
Homepage -
License -
Maintainer -
Download size 6.80 MB
Installed size 9.28 MB
Bowtie is an ultrafast, memory-efficient short read aligner geared
toward quickly aligning large sets of short DNA sequences (reads)
to large genomes.
Home: http://bowtie-bio.sourceforge.net/
References: /usr/doc/bowtie-1.0.0/References

Alternatives

Package Version Architecture Repository
bowtie-1.0.0-i486-1_slack.txz 1.0.0 i486 Slackonly
bowtie - - -

Download

Type URL
Mirror packages.slackonly.com
Binary Package bowtie-1.0.0-x86_64-1_slack.txz
Source Package -

Install Howto

  1. Download bowtie-1.0.0-x86_64-1_slack.txz
  2. Install bowtie txz package:
    # upgradepkg --install-new bowtie-1.0.0-x86_64-1_slack.txz

Files

Path
/install/slack-desc
/usr/
/usr/bin/bowtie
/usr/bin/bowtie-build
/usr/bin/bowtie-inspect
/usr/doc/
/usr/doc/bowtie-1.0.0/AUTHORS
/usr/doc/bowtie-1.0.0/LICENSE
/usr/doc/bowtie-1.0.0/MANUAL
/usr/doc/bowtie-1.0.0/NEWS
/usr/doc/bowtie-1.0.0/References
/usr/doc/bowtie-1.0.0/TUTORIAL
/usr/doc/bowtie-1.0.0/VERSION
/usr/doc/bowtie-1.0.0/bowtie.SlackBuild
/usr/doc/bowtie-1.0.0/doc/README
/usr/doc/bowtie-1.0.0/doc/manual.html
/usr/doc/bowtie-1.0.0/doc/strip_markdown.pl
/usr/doc/bowtie-1.0.0/doc/style.css
/usr/share/
/usr/share/bowtie/
/usr/share/bowtie/genomes/NC_008253.fna.gz
/usr/share/bowtie/indexes/e_coli.1.ebwt.gz
/usr/share/bowtie/indexes/e_coli.2.ebwt.gz
/usr/share/bowtie/indexes/e_coli.3.ebwt.gz
/usr/share/bowtie/indexes/e_coli.4.ebwt.gz
/usr/share/bowtie/indexes/e_coli.README
/usr/share/bowtie/indexes/e_coli.rev.1.ebwt.gz
/usr/share/bowtie/indexes/e_coli.rev.2.ebwt.gz
/usr/share/bowtie/reads/e_coli_1000.fa
/usr/share/bowtie/reads/e_coli_1000.fq
/usr/share/bowtie/reads/e_coli_1000.raw
/usr/share/bowtie/reads/e_coli_10000snp.fa
/usr/share/bowtie/reads/e_coli_10000snp.fq
/usr/share/bowtie/reads/e_coli_1000_1.fa
/usr/share/bowtie/reads/e_coli_1000_1.fq
/usr/share/bowtie/reads/e_coli_1000_2.fa
/usr/share/bowtie/reads/e_coli_1000_2.fq
/usr/share/bowtie/scripts/best_verify.pl
/usr/share/bowtie/scripts/bs_mapability.pl
/usr/share/bowtie/scripts/build_test.sh
/usr/share/bowtie/scripts/colorize_fasta.pl
/usr/share/bowtie/scripts/colorize_fastq.pl
/usr/share/bowtie/scripts/convert_quals.pl
/usr/share/bowtie/scripts/fastq_to_tabbed.pl
/usr/share/bowtie/scripts/gen_2b_occ_lookup.pl
/usr/share/bowtie/scripts/gen_dnamasks2colormask.pl
/usr/share/bowtie/scripts/gen_occ_lookup.pl
/usr/share/bowtie/scripts/gen_solqual_lookup.pl
/usr/share/bowtie/scripts/infer_fraglen.pl
/usr/share/bowtie/scripts/make_a_thaliana_tair.sh
/usr/share/bowtie/scripts/make_b_taurus_UMD3.sh
/usr/share/bowtie/scripts/make_c_elegans.sh
/usr/share/bowtie/scripts/make_canFam2.sh
/usr/share/bowtie/scripts/make_d_melanogaster.sh
/usr/share/bowtie/scripts/make_e_coli.sh
/usr/share/bowtie/scripts/make_galGal3.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi36.sh
/usr/share/bowtie/scripts/make_h_sapiens_ncbi37.sh
/usr/share/bowtie/scripts/make_hg18.sh
/usr/share/bowtie/scripts/make_hg19.sh
/usr/share/bowtie/scripts/make_m_musculus_ncbi37.sh
/usr/share/bowtie/scripts/make_mm8.sh
/usr/share/bowtie/scripts/make_mm9.sh
/usr/share/bowtie/scripts/make_rn4.sh
/usr/share/bowtie/scripts/make_s_cerevisiae.sh
/usr/share/bowtie/scripts/mapability.pl
/usr/share/bowtie/scripts/pe_verify.pl
/usr/share/bowtie/scripts/random_bowtie_tests.pl
/usr/share/bowtie/scripts/random_bowtie_tests.sh
/usr/share/bowtie/scripts/random_bowtie_tests_p.sh
/usr/share/bowtie/scripts/reconcile_alignments.pl
/usr/share/bowtie/scripts/reconcile_alignments_pe.pl

See Also

Package Description
bowtie2-2.1.0-x86_64-1_slack.txz A tool for aligning sequencing reads
boxes-1.1.1-x86_64-1_slack.txz ASCII Box Drawing
bozohttpd-20150320-x86_64-2_slack.txz simple and lightweight HTTP server
bpython-0.14.2-x86_64-7_slack.txz Fancy Interface to the Python Interpreter
brackets-1.5-x86_64-1_slack.txz code editor for the web
brainparty-0.61-x86_64-1_slack.txz puzzle game
brasero-3.12.1-x86_64-1_slack.txz CD/DVD burning application
brewtarget-2.0.2-x86_64-1_slack.txz free brewing software
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briquolo-0.5.7-x86_64-1_slack.txz breakout with 3D representation based on OpenGL
briss-0.9-noarch-6_slack.txz The BRIght Snippet Sire
bristol-0.60.11-x86_64-1_slack.txz Synthesiser Emulations on Linux
brlcad-7.24.2-x86_64-1_slack.txz Open-source solid modeling system
broadcom-sta-6.30.223.271_3.10.17-x86_64-2_slack.txz Broadcom wireless drivers
broffice.org-3.2.1_pt_BR-x86_64-6_slack.txz pt_BR version of OOo
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