bedtools-2.25.0-x86_64-1_slack.txz


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Description

bedtools - A powerful toolset for genome arithmetic

Property Value
Distribution Slackware 14.1
Repository Slackonly x86_64
Package filename bedtools-2.25.0-x86_64-1_slack.txz
Package name bedtools
Package version 2.25.0
Package release 1_slack
Package architecture x86_64
Package type txz
Homepage -
License -
Maintainer -
Download size 2.86 MB
Installed size 4.54 MB
The bedtools utilities are a swiss-army knife of tools for a
wide-range of genomics analysis tasks. The most widely-used
tools enable genome arithmetic: that is, set theory on the
genome.
Home: http://bedtools.readthedocs.org/

Alternatives

Package Version Architecture Repository
bedtools-2.25.0-i486-1_slack.txz 2.25.0 i486 Slackonly
bedtools - - -

Download

Type URL
Mirror packages.slackonly.com
Binary Package bedtools-2.25.0-x86_64-1_slack.txz
Source Package -

Install Howto

  1. Download bedtools-2.25.0-x86_64-1_slack.txz
  2. Install bedtools txz package:
    # upgradepkg --install-new bedtools-2.25.0-x86_64-1_slack.txz

Files

Path
/install/slack-desc
/usr/
/usr/bin/annotateBed
/usr/bin/bamToBed
/usr/bin/bamToFastq
/usr/bin/bed12ToBed6
/usr/bin/bedToBam
/usr/bin/bedToIgv
/usr/bin/bedpeToBam
/usr/bin/bedtools
/usr/bin/closestBed
/usr/bin/clusterBed
/usr/bin/complementBed
/usr/bin/coverageBed
/usr/bin/expandCols
/usr/bin/fastaFromBed
/usr/bin/flankBed
/usr/bin/genomeCoverageBed
/usr/bin/getOverlap
/usr/bin/groupBy
/usr/bin/intersectBed
/usr/bin/linksBed
/usr/bin/mapBed
/usr/bin/maskFastaFromBed
/usr/bin/mergeBed
/usr/bin/multiBamCov
/usr/bin/multiIntersectBed
/usr/bin/nucBed
/usr/bin/pairToBed
/usr/bin/pairToPair
/usr/bin/randomBed
/usr/bin/shuffleBed
/usr/bin/slopBed
/usr/bin/sortBed
/usr/bin/subtractBed
/usr/bin/tagBam
/usr/bin/unionBedGraphs
/usr/bin/windowBed
/usr/bin/windowMaker
/usr/doc/
/usr/doc/bedtools-2.25.0/LICENSE
/usr/doc/bedtools-2.25.0/README.md
/usr/doc/bedtools-2.25.0/RELEASE_HISTORY
/usr/doc/bedtools-2.25.0/bedtools.SlackBuild
/usr/share/
/usr/share/bedtools/
/usr/share/bedtools/data/aluY.chr1.bed.gz
/usr/share/bedtools/data/gerp.chr1.bed.gz
/usr/share/bedtools/data/knownGene.hg18.chr21.bed
/usr/share/bedtools/data/knownGene.hg18.chr21.short.bed
/usr/share/bedtools/data/refseq.chr1.exons.bed.gz
/usr/share/bedtools/data/simpleRepeats.chr1.bed.gz
/usr/share/bedtools/genomes/human.hg18.genome
/usr/share/bedtools/genomes/human.hg19.genome
/usr/share/bedtools/genomes/human.hg38.genome
/usr/share/bedtools/genomes/mouse.mm10.genome.txt
/usr/share/bedtools/genomes/mouse.mm8.genome
/usr/share/bedtools/genomes/mouse.mm9.genome
/usr/share/bedtools/scripts/makeBashScripts.py
/usr/share/bedtools/scripts/vcfsort.sh

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betty-0.1.7-x86_64-2_slack.txz a command-line helper tool
bfg-1.12.3-noarch-6_slack.txz git repo cleaner
biblesync-1.1.2-x86_64-1_slack.txz a bible software shared navigation protocol library
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bibus-1.5.2-noarch-1_slack.txz bibliographic database
bibutils-5.0-x86_64-1_slack.txz Converter library for various bibliography formats
bicon-0.5-x86_64-1_slack.txz a Bidirectional Console
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